最近の学術論文 (2003年以降)

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1. Tani-Matsuhana, S., Kawata, Y., and Inoue, K. (2023)
   The cardiac neural crest gene MafB ectopically directs CXCR4 expression in the trunk neural crest.
   Dev. Biol. 495, 1-7.
2. Miwa, T., Ohtani, K., Inoue, K., and Sakamoto, H. (2022)
   The germ cell-specific TAP-like protein NXF-2 forms a novel granular structure and is required for tra-2 3'UTR-dependent mRNA export in Caenorhabditis elegans.
   Genes to Cells 27, 621-628.
3. Fukumura, K., Yoshimoto, R., Sperotto, L., Kang, H.-S., Hirose, T., Inoue, K., Sattler, M., and Mayeda, A. (2021)
   SPF45/RBM17-dependent, but not U2AF-dependent, splicing in a distinct subset of human short introns.
   Nature Communications 12, 4910.
4. Tani-Matsuhana, S. and Inoue, K. (2021)
   Identification of regulatory elements for MafB expression in the cardiac neural crest.
   Cells and Development 167, 203725.
5. Mishima, Y. and Inoue, K. (2021)
   Tethered function assay to study RNA regulatory proteins in zebrafish embryos.
   Methods in Molecular Biology 2218:347-354.
6. Fukuchi, H., Hayashida, Y., Inoue, K., and Sadamura, Y. (2019)
   Forkhead box B2 inhibits the malignant characteristics of the pancreatic cancer cell line Panc-1 in vitro.
   Genes to Cells 24, 674-681. Genes to Cells 24, 377-389. [PUBMED 30929290]
7. Miwa, T., Inoue, K., and Sakamoto, H. (2019)
   MRG-1 is required for both chromatin-based transcriptional silencing and genomic integrity of primordial germ cells in C. elegans.
   Genes to Cells 24, 377-389. [PUBMED 30929290]
8. Tani-Matsuhana, S., Vieceli, F. M., Gandhi, S., Inoue, K., and Bronner, M. E. (2018)
   Transcriptome profiling of the cardiac neural crest reveals a critical role for MafB.
   Dev. Biol. 444, S209-S218. (The Neural Crest: 150 years after His' discovery) [PUBMED 30236445]
9. Tani-Matsuhana, S.*, Kusakabe, R., and Inoue, K. (2018)
   Developmental mechanisms of migratory muscle precursors in medaka pectoral fin formation.
   Dev. Genes Evol. 228, 189-196. [PUBMED 30008036]
10. Fukumura, K. Inoue, K., and Mayeda, A. (2018)
    Splicing activator RNPS1 suppresses errors in pre-mRNA splicing: a key factor for mRNA quality control.
    Biochem. Biophys. Res. Commun. 496, 921-926 [PUBMED 29366779 ]
11. Kobayashi, M., Tani-Matsuhana, S., Ohkawa, Y., Sakamoto, H., and Inoue, K. (2017)
    DND protein functions as a translation repressor during zebrafish embryogenesis.
    Biochem. Biophys. Res. Commun. 484, 235-240 [PUBMED 28115159]
12. Yamamoto, K., Furukawa, M.T., Fukumura, K., Kawamura, A., Yamada, T., Suzuki, H., Hirose, T., Sakamoto, H., and Inoue, K (2016)
    Control of the heat stress-induced alternative splicing of a subset of genes by hnRNP K.
    Genes to Cells 21, 1006-1014 [PUBMED 27491955]
13. Fukumura, K., Wakabayashi, S., Kataoka, N., Sakamoto, H., Suzuki, Y., Nakai, K., Mayeda, A. and Inoue, K. (2016)
    The Exon Junction Complex controls the efficient and faithful splicing of a subset of transcripts involved in mitotic cell-cycle progression.
    International Journal of Molecular Sciences 17(8), e1153. [PUBMED 27490541]
14. Kusakabe, R. & Inoue, K. (2015)
    Developmental regulation and evolution of muscle-specific microRNAs. [Review]
    Seminars in Cell & Developmental Biology 47-48, 9-16. [PUBMED 26493706]
15. Miwa, T., Takasaki, T., Inoue, K., and Sakamoto, H. (2015)
    Restricted distribution of mrg-1 mRNA in C. elegans primordial germ cells through germ granule-independent regulation.
    Genes to Cells 20, 932-942. [PUBMED 26537333]
16. Furukawa, M.T., Sakamoto, H., and Inoue, K.(2015)
    Interaction and colocalization of HERMES/RBPMS with NonO, PSF, and G3BP1 in neuronal cytoplasmic RNP granules in mouse retinal line cells.
    Genes to Cells 20, 257-266. [PUBMED 25651939]
17. Makino, S., Mishima, Y., Inoue, K., and Inada, T. (2015)
    Roles of mRNA-fate modulators Dhh1 and Pat1 in TNRC6-dependent gene silencing recapitulated in yeast.
    J. Biol. Chem. 290, 8331-47. [PUBMED 25657010]
18. Saito, T., Psenicka, M., Goto-Kazeto, R., Inoue, K., Adachi, S., Arai, K., and Yamaha, E. (2014)
    The origin and migration of primordial germ cells in sturgeons.
    PLoS ONE 9, e86861 [PUBMED 24505272]
19. Kato, Y., Kusakabe, R., Inoue, K., and Tochinai, S.(2013)
    miR-124 is involved in post-transcriptional regulation of polypyrimidine tract binding protein 1 (PTBP1) during neural development in the medaka, Oryzias latipes.
    Zool. Sci. 30, 891-900 [PUBMED 24199853]
20. Tani, S., Kuraku, S., Sakamoto, H., Inoue, K., and Kusakabe, R.(2013)
    Developmental expression and evolution of muscle-specific microRNAs conserved in vertebrates.
    Evolution & Development 15, 293-304 [PUBMED 23809703]
21. Shiimori, M., Inoue, K., Sakamoto, H.(2013)
    A specific set of exon junction complex subunits is required for the nuclear retention of unspliced RNAs in Caenorhabditis elegans.
    Mol. Cell. Biol. 33, 444-456 [PUBMED 23149939]
22. Kusakabe, R., Tani, S., Nishitsuji, K., Shindo, M., Okamura, K., Miyamoto, Y., Nakai, K., Suzuki, Y., Kusakabe, T. G., and Inoue, K.(2013)
    Characterization of the compact bicistronic microRNA precursor, miR-1/miR-133, expressed specifically in Ciona muscle tissues.
    Gene Exp. Patterns 13, 43-50 [PUBMED 23159539]
23. Nishibu, T., Hayashida, Y., Tani, S., Kurono, S., Ukekawa, R., Kojima-Kita, K., Kurokawa, T., Kuramochi-Miyagawa, S., Nakano, T., Inoue, K., Honda, S. (2012)
    Identification of MIWI-associated poly(A) RNAs by immunoprecipitation with an anti-MIWI monoclonal antibody.
    BioScience Trends 6, 248-261 [PUBMED 23229118]
24. Mishima, Y., Fukao, A., Kishimoto, T., Sakamoto, H., Fujiwara, T., Inoue, K.(2012)
    Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish.
    Proc. Natl. Acad. Sci. USA 109, 1104-1109 [PUBMED 22232654]
25. Fujiwara, T., Fukao, A., Sasano, Y., Matsuzaki, H., Kikkawa, U., Imataka, A., Inoue, K., Endo, S., Sonenberg, N. Thoma, C., & Sakamoto, H.(2012)
    Functional and direct interaction between the RNA binding protein HuD and active Akt1
    Nucleic Acids Res. 40, 1944-1953 [PUBMED 22075994]
26. Fujiwara, Y., Kasashima, K., Saito, K., Fukuda, M., Fukao, A., Sasano, Y., Inoue, K., Fujiwara, T., & Sakamoto, H. (2011)
    Microtubule association of a neuronal RNA-binding protein HuD through its binding to the light chain of MAP1B.
    Biochimie 93, 817-22 [PUBMED 21288476]
27. Tani, S., Kusakabe, R., Naruse, K., Sakamoto, H., & Inoue, K.(2010)
    Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development.
    Gene 449, 41-49 [PUBMED 19770025]
28. Fukao, A., Sasano, Y., Imataka, H., Inoue, K., Sakamoto, H., Sonenberg, N., Thoma, C & Fujiwara, T.(2009)
    The ELAV protein HuD stimulates cap-dependent translation in a poly(A)- and eIF4A-dependent manner.
    Mol. Cell 36,1007-1017 [PUBMED 20064466]
29. Takeda, Y., Mishima, Y., Fujiwara, T., Sakamoto, H., & Inoue, K.(2009)
    DAZL relieves miRNA-mediated repression of germline mRNAs by controlling poly(A) tail length in zebrafish.
    PLoS ONE 4, e7513 [PUBMED 19838299]
30. Hayashida, Y., Nishibu, T., Inoue, K., & Kurokawa, T. (2009)
    A useful approach to total analysis of RISC-associated RNA.
    BMC Research Notes 2, 169 [PUBMED 19706194]
31. Fukumura, K., & Inoue, K. (2009)
    Role and mechanism of U1-independent pre-mRNA splicing in the regulation of alternative splicing.
    RNA Biol. 6, 395-398 [PUBMED 19667760]
32. Hayashi, S, Akiyama, S., Tamaru, Y., Takeda, Y., Fujiwara, T., Inoue, K., Kobayashi, A., Maegawa, S., & Fukusaki, E. (2009)
    A novel application of metabolomics in vertebrate development.
    Biochem. Biophys. Res. Commun. 386, 268-272 [PUBMED 19523925]
33. Suzuki, H., Tsukahara, T., & Inoue K. (2009)
    Localization of c-mos mRNA around the animal pole in the zebrafish oocyte with Zor-1/Zorba.
    BioScience Trends 3, 96-104 [PUBMED 20103830]
34. Fukumura, K., Taniguchi, I., Sakamoto, H., Ohno, M., & Inoue, K. (2009)
    U1-independent pre-mRNA splicing contributes to the regulation of alternative splicing.
    Nucleic Acids Res. 37, 1907-1914 [PUBMED 19190090]
35. Sasano, Y., Hokii, Y., Inoue, K., Sakamoto, H., Ushida, C. & Fujiwara, T. (2008)
    Distribution of U3 small nucleolar RNA and fibrillarin during early embryogenesis in Caenorhabditis elegans.
    Biochimie 90, 898-907 [PUBMED 18312858]
36. Fukumura, K., Kato, A., Jin, Y., Ideue, T., Hirose, T., Kataoka, N., Fujiwara, T., Sakamoto, H., & Inoue, K.(2007)
    Tissue-specific splicing regulator Fox-1 induces exon skipping by interfering E complex formation on the downstream intron of human F1γ gene.
    Nucleic Acids Res. 35, 5303-5311 [PUBMED 17686786]
    
37. Kosaka, K., Kawakami, K., Sakamoto, H., & Inoue, K.(2007)
    Spatiotemporal localization of germ plasm RNAs during zebrafish oogenesis.
    Mech. Dev. 124,279-289 [PUBMED 17293094]
38. Takasaki, T., Liu, Z., Habara, Y., Nishiwaki, K., Nakayama, J., Inoue, K., Sakamoto, H., & Strome, S. (2007)
    MRG-1, an autosome-associated protein, silences X-linked genes and protects germline immortality in Caenorhabditis elegans. 
    Development  134, 757-767 [PUBMED 17215300]
39. Uechi, T., Nakajima, Y., Nakao, A., Torihara, H., Chakraborty, A., Inoue, K., & Kenmochi, N.  (2006)
    Ribosomal protein gene knockdown causes developmental defects in Zebrafish. 
    PLoS ONE e37. [PUBMED 17183665]
40. Mishima, Y., Giraldez, A.J., Takeda, Y., Fujiwara, T., Sakamoto, H., Schier, A.F., & Inoue, K. (2006)
    Differential regulation of germline specific mRNAs in soma and primordial germ cells by zebrafish miR-430.
    Current Biology 16, 2135-2142. [PUBMED 17084698]
41. Giraldez, A..J, Mishima, Y., Rihel, J., Grocock, R., Dongen, S.V., Inoue, K., Enright, A.J. & Schier, A.F. (2006)
    Zebrafish miR-430 promotes deadenylation and clearance of maternal mRNAs.
    Science 315, 75-79. [PUBMED 16484454]
42. Saito, T., Fujimoto, T., Maegawa, S., Inoue, K., Tanaka, M., Arai, K., & Yamaha, E. (2006)
    Visualization of primordial germ cells in vivo using GFP-nos1 3'UTR mRNA.
    Int. J. Dev. Biol. 50, 691-699.[PUBMED 17051479]
43. Hashimoto, Y., Suzuki, H., Kageyama, Y., Yasuda, K., & Inoue, K. (2006)
    Bruno-like protein is localized to zebrafish germ plasm during the early cleavage stages.
    Gene Expr. Patterns 6, 201-205. [PUBMED 16168720]
44. Otani, S., Kitauchi, T., Saito,T., Sakao, S., Maegawa, S., Inoue, K., Arai, K., & Yamaha, E. (2005)
    The formation of primordial germ cells from germline cells in spherical embryos derived from the blastodisc of 2-cell embryos in goldfish, Carassius auratus.
    Int. J. Dev. Biol. 49, 843-850. [PUBMED 16172980]
45. Masuhiro, Y., Mezaki, Y., Sakari, M., Takeyama, K., Yoshida, T., Inoue, K., Yanagisawa, J., Hanazawa, S., O'Malley B, W., and Kato, S. (2005)
    Splicing potentiation by growth factor signals via estrogen receptor phosphorylation.
    Proc. Natl. Acad. Sci. USA 102, 8126-8131. [PUBMED 15919818]
46. Hashimoto, Y., Maegawa, S., Nagai, T., Yamaha, E., Suzuki, H., Yasuda, K., & Inoue, K. (2004)
    Localized maternal factors are required for zebrafish germ cell formation.
    Dev. Biol. 268, 152-161. [PUBMED 15031112]
47. Saito, K., Fujiwara, T., Katahira, J., Inoue, K., & Sakamoto, H. (2004)
    TAP/NXF1, the primary mRNA export receptor, specifically interacts with a neuronal RNA-binding protein HuD.
    Biochem. Biophys. Res. Commun. 321, 291-297. [PUBMED 15358174]
48. Saijou, E., Fujiwara, T., Suzaki, T., Inoue, K., & Sakamoto, H. (2004)　
    RBD-1, a nucleolar RNA-binding protein, is essential for Caenorhabditis elegans early development through 18S ribosomal RNA processing.
    Nucleic Acids Res. 32, 1028-1036. [PUBMED 14872060]
49. Jin, Y., Suzuki, H., Maegawa, S., Endo, H., Sugano, S., Hashimoto, K., Yasuda, K., & Inoue, K. (2003)　
    A vertebrate RNA-binding protein Fox-1 regulates tissue-specific splicing via the pentanucleotide GCAUG.
    EMBO J. 22, 905-912. [PUBMED 12574126]